org.strbio.mol.lib
Class OptimalFRParameters

java.lang.Object
  org.strbio.mol.lib.FRParameters
      org.strbio.mol.lib.OptimalFRParameters

All Implemented Interfaces:

Description

public class OptimalFRParameters
extends FRParameters

The optimal fold recognition parameters.

  Version 1.2, 4/12/00 - from trs.mult.elim16o.top5
  Version 1.1, 2/29/00 - from trs.elim15g.top5
  Version 1.0, 2/17/00 - original version, from trs.single4.top5
  

Version:

1.2, 4/12/00

Author:

JMC

Field Summary

Fields inherited from class org.strbio.mol.lib.FRParameters

bias, methods, scoreMatch, scoreNonMatch, weightLength

Constructor Summary

OptimalFRParameters()
optimal fr parameters, by top5

Method Summary

java.lang.String

defaultEAFileFR() Accuracy was parameterized on the TOM data set.

Methods inherited from class org.strbio.mol.lib.FRParameters

addMethod, canEstimateFR, clearEstFRStats, describe, estFRAccy, loadEstFRStats, loadEstFRStats, loadEstFRStats, loadEstFRStatsRaw, loadEstFRStatsRaw, main, method, nMethods, processFR, saveEstFRStats, saveEstFRStats

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OptimalFRParameters

public OptimalFRParameters()

optimal fr parameters, by top5

Method Detail

defaultEAFileFR

public java.lang.String defaultEAFileFR()

Accuracy was parameterized on the TOM data set.

Overrides:

defaultEAFileFR in class FRParameters