Uses of Class
org.strbio.util.db.SCOPInfo

Packages that use SCOPInfo

org.strbio.net	These classes are for running or exchanging data with non-local programs (i.e., programs that you run by submitting data to a web page).
org.strbio.util.db	These classes are a primitive interface to store and manipulate protein structure information from various commonly used databases.

Uses of SCOPInfo in org.strbio.net

Methods in org.strbio.net that return SCOPInfo

static SCOPInfo	SCOP.getInfo(java.lang.String rawdata) returns numbers and domain name from query, if found, or null if not found.
static SCOPInfo[]	SCOP.getInfoLinks(java.lang.String rawdata) returns numbers in links from query, if found, or null if not found

Methods in org.strbio.net with parameters of type SCOPInfo

static java.lang.String

SCOP.getRawAnnotNumeric(SCOPInfo si, Printf outfile) Query the server for annotation data, using numeric entries in SCOPInfo.

Uses of SCOPInfo in org.strbio.util.db

Methods in org.strbio.util.db with parameters of type SCOPInfo

int	SCOPInfo.matchesLevel(SCOPInfo y) What is the highest level this matches another record at?
boolean	SCOPInfo.matchesUpTo(SCOPInfo y, int n) Does this match another SCOP record up to level N?