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Packages that use IVector | |
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org.strbio.math | These classes perform functions related to mathematics and statistics. |
org.strbio.mol | These classes represent objects or concepts useful to structural biologists. |
org.strbio.mol.lib | These classes represent conceptual objects used in structural biology algorithms. |
Uses of IVector in org.strbio.math |
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Subclasses of IVector in org.strbio.math | |
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class |
Bin
a class which does 1-D histogram-bins. |
class |
Bin2D
This saves samples pairs of data, and remembers some stats about the y values for each bin. |
class |
FBin
a class which does 1-D histogram-FBins. |
class |
Sampler
This is a special case of Bin that samples data and can later return statistics like average, standard deviation. |
Methods in org.strbio.math that return IVector | |
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static IVector |
IVector.add(IVector a,
IVector b)
Adds two IVector's and returns a new IVector containing the sum. |
IVector |
IVector.cross(IVector x)
Returns the cross product of multiplying this with another vector. |
static IVector |
IVector.cross(IVector x,
IVector y)
Returns the cross product of multiplying two vectors. |
IVector |
IVector.eliminate(int pos)
Return a copy of the vector with one position removed. |
IVector |
DVector.findNClosest(int n,
double v)
What are the indices of the N closest values to a given double? |
IVector |
DVectorSet.findNClosest(int n,
DVector v)
What are the indices of the N closest values to a DVector? |
IVector |
FVector.findNClosest(int n,
float v)
What are the indices of the N closest values to a given float? |
static IVector |
IVector.multiply(int b,
IVector a)
Multiplies a IVector by an int and returns a new IVector containing the result. |
static IVector |
IVector.multiply(IVector a,
int b)
Multiplies a IVector by an int and returns a new IVector containing the result. |
static IVector |
IVector.reverse(IVector x)
returns a vector which is the reverse of this one. |
IVector |
FVector.sort()
returns a vector of indices to sort an FVector (small -> large). |
IVector |
IVector.sort()
returns a vector of indices to sort an IVector (small -> large). |
IVector |
DVector.sort()
returns a vector of indices to sort an DVector (small -> large). |
static IVector |
IVector.subtract(IVector a,
IVector b)
Subtracts one IVector's from another returns a new IVector containing the difference. |
Methods in org.strbio.math with parameters of type IVector | |
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void |
IVector.add(IVector x)
Adds another IVector to this one. |
static IVector |
IVector.add(IVector a,
IVector b)
Adds two IVector's and returns a new IVector containing the sum. |
IVector |
IVector.cross(IVector x)
Returns the cross product of multiplying this with another vector. |
static IVector |
IVector.cross(IVector x,
IVector y)
Returns the cross product of multiplying two vectors. |
int |
IVector.dot(IVector x)
Returns the dot product of multiplying this with another vector. |
static int |
IVector.dot(IVector x,
IVector y)
Returns the dot product of multiplying two vectors. |
static IVector |
IVector.multiply(int b,
IVector a)
Multiplies a IVector by an int and returns a new IVector containing the result. |
static IVector |
IVector.multiply(IVector a,
int b)
Multiplies a IVector by an int and returns a new IVector containing the result. |
static IVector |
IVector.reverse(IVector x)
returns a vector which is the reverse of this one. |
void |
IVector.subtract(IVector x)
Subtracts another IVector from this one. |
static IVector |
IVector.subtract(IVector a,
IVector b)
Subtracts one IVector's from another returns a new IVector containing the difference. |
Constructors in org.strbio.math with parameters of type IVector | |
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DVector(IVector x)
copies an IVector, copying the data and casting to doubles. |
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FVector(IVector x)
copies an IVector, copying the data and casting to floats. |
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IVector(IVector x)
copies another IVector. |
Uses of IVector in org.strbio.mol |
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Methods in org.strbio.mol that return IVector | |
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IVector |
ThreadSet.getSortedScores(int i)
Get an IVector of sorted probabilities for one of the proteins in the seqs set, from most to least likely, or null if this has not been calculated. |
Uses of IVector in org.strbio.mol.lib |
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Fields in org.strbio.mol.lib declared as IVector | |
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IVector |
ThreadResults.sorted
A sorted vector of the probabilities, from highest to lowest. |
Methods in org.strbio.mol.lib that return IVector | |
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IVector |
Sippl90.getRaw(char a,
char b,
int k)
Returns a vector of raw N(a,b,k) |
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