Package org.strbio.util

These classes perform general purpose utility functions.

See:
Description

Interface Summary

CGOptimizer	This is a pretty generic interface for CJ optimizing routines.
CGOptimizer.Optimizable	This is the interface you have to implement if you want to optimize using NRMin.
ColorScale	Color scales for use in graphical programs.
DLinkedList.Node	This is the interface you have to implement if you want to put objects in this linked list.
Hooke.Optimizable	This is the interface you have to implement if you want to optimize using Hooke.
NeuralNet.Trainable	This is the interface you have to implement for objects that are to be used used in training neural nets.

Class Summary

ActionJButton	In Swing 1.1.x and Java 1.2.x, a button can no longer be created for an Action using the "invisible toolbar" method.
BarLegend	A legend for graphs, showing a bar indicating which ColorScale colors correspond to which numeric values.
ColorScale.BlackScale	A scale going from white to black.
ColorScale.BlendScale	A scale blending one color into another.
ColorScale.BlueScale	A scale going from black to blue.
ColorScale.GreenScale	A scale going from black to green.
ColorScale.RainbowScale	A ROYGBIV scale going from R(low) to V(high)
ColorScale.RainbowScale2	A ROYGBIV scale going from V(low) to R(high)
ColorScale.RedScale	A scale going from black to red.
ColorScale.WhiteScale	A scale going from black to white.
DensityPlot	A component that displays a density plot (an overhead view of a matrix, with squares colored by value).
DLinkedList	A double linked list of objects, with random access to the nth object in the list.
Hooke	Class for numerical nonlinear optimzation, using the method of Hooke and Jeeves.
HTML	Useful functions for manipulating HTML Version 1.0, 5/18/07
JMC	A class containing a bunch of useful functions
JMCScrollPane	This is basically a lame re-implementation of ScrollPane, but it works with AWT 1.0 applets... can therefore use for Netscape 4.0, which supports Java 1.1 with AWT 1.0.
NeuralNet	Class encapsulating a neural network.
StringUtil	Useful functions for doing stuff with strings.

Package org.strbio.util Description

These classes perform general purpose utility functions.